01 - Preheat oven to 400°F. Line a baking sheet with parchment paper or aluminum foil.
02 - In a medium mixing bowl, whisk together the chipotle peppers, honey, olive oil, apple cider vinegar, minced garlic, smoked paprika, kosher salt, and black pepper until smooth and well combined.
03 - Pat the chicken thighs dry with paper towels and arrange them skin-side up on the prepared baking sheet.
04 - Generously brush the chipotle-honey sauce over each chicken thigh, ensuring even coverage. Reserve about 2 tablespoons of the sauce for glazing later.
05 - Bake for 30 minutes, or until the juices run clear and the skin is golden brown and crispy.
06 - Remove the baking sheet from the oven. Brush the chicken thighs with the reserved sauce, then sprinkle the shredded smoked Gouda evenly over each piece.
07 - Return to the oven for 5 minutes, or until the cheese is fully melted and bubbling.
08 - Transfer to a serving platter, garnish with fresh cilantro, and serve with lime wedges alongside.